Information for 9-CATTTCAAAA (Motif 9)

G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A
Reverse Opposite:
G C A T C G A T G A C T C A G T C T A G G T C A C G T A T C G A C G A T C A T G
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.533
Number of Target Sequences with motif163.0
Percentage of Target Sequences with motif19.40%
Number of Background Sequences with motif6075.4
Percentage of Background Sequences with motif12.76%
Average Position of motif in Targets51.1 +/- 29.7bp
Average Position of motif in Background50.6 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAA--
-ATTGCACAATA
 G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CATTTCAAAA
CGGTTTCAAA-
 A C G T G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CATTTCAAAA
-NATTCAAAT
 G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAA-
-ACATCAAAGG
 G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTTCAAAA----
CAATTGCAAAAATAT
 A C G T G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAA
-ATTGCATAA
 G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATTTCAAAA---
AATCAATTCAATAATT
 A C G T A C G T A C G T G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTTCAAAA-
-VTTRCATAAY
 G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTCAAAA
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATTTCAAAA-
-ACWTCAAAGG
 G T A C G C T A A G C T G C A T C A G T G A T C G T C A C T G A G C T A C G T A A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G