Information for 5-GATGTAHAGTGAG (Motif 6)

A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A G A T C A G C T C G T A A C G T G T C A A G T C C G T A A C G T G T A C
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.823
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.7 +/- 21.0bp
Average Position of motif in Background49.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GATGTAHAGTGAG
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GATGTAHAGTGAG------
AGATSTNDNNDSAGATAASN
 A C G T A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GATGTAHAGTGAG
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GATGTAHAGTGAG
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GATGTAHAGTGAG-----
-AAACATAATGAGGTTGC
 A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GATGTAHAGTGAG
--TGTGGATTNNN
 A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GATGTAHAGTGAG--
---GWAAYHTGABMC
 A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GATGTAHAGTGAG--
-----NTAATGAGCT
 A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GATGTAHAGTGAG
-ATGAATATTC--
 A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GATGTAHAGTGAG----
NNTNNACAATGGGANNN
 A C T G C G T A A C G T A C T G A C G T T G C A G A C T C T G A C T A G A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A