Information for 18-MCTGCCWATGRCA (Motif 28)

G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
Reverse Opposite:
C A G T A C T G G A C T T G A C C G T A G A C T C G T A A C T G C A T G T G A C C G T A T A C G A C G T
p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.727
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif68.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets42.6 +/- 15.3bp
Average Position of motif in Background55.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:MCTGCCWATGRCA
NCTGTCAATCAN-
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:MCTGCCWATGRCA
SCTGTCAVTCAV-
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:MCTGCCWATGRCA-
-------TTGACAG
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---MCTGCCWATGRCA
CCAACTGCCA------
 A C G T A C G T A C G T G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MCTGCCWATGRCA
--AGCCAATCGG-
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:MCTGCCWATGRCA
GGTGCCAAGT---
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:forward strand
Alignment:MCTGCCWATGRCA--
-------TTGACAGG
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MCTGCCWATGRCA
--TGCCAA-----
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:MCTGCCWATGRCA-
------RHTGWCAR
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:8
Orientation:forward strand
Alignment:MCTGCCWATGRCA---
--------TGTCANYT
 G T C A A T G C C G A T A C T G G A T C A G T C G C A T C G T A A C G T A C T G C T G A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T