Information for 1-AGAGAACTCATAC (Motif 1)

C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
Reverse Opposite:
C A T G G A C T C T G A A C G T A C T G C G T A C T A G A C G T A G C T A G T C C G A T G A T C C G A T
p-value:1e-115
log p-value:-2.668e+02
Information Content per bp:1.789
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif10.18%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.4 +/- 26.6bp
Average Position of motif in Background48.8 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAGAACTCATAC--
AAGGCGAAATCATCGCA
 A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAGAACTCATAC
-AAGCACTTAA--
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGAACTCATAC
--ATGACTCAT--
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAACTCATAC
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAGAACTCATAC
-CATGACTCATC-
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGAACTCATAC
GGATGACTCATC-
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGAACTCATAC
--AAAAGTCAA--
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAGAACTCATAC
-NATGAGTCACN-
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAGAACTCATAC
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGAGAACTCATAC
AGGAGATGACTCAT--
 A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C C G A T A G T C G T C A G A C T C T G A G T A C
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T A C G T A C G T