Information for 7-SAGCCYCAGGTCC (Motif 9)

A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C
Reverse Opposite:
A T C G T A C G C T G A A G T C A G T C C G A T A C T G C T A G A C T G A T C G A G T C A G C T A T C G
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.842
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.9 +/- 23.9bp
Average Position of motif in Background60.3 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:SAGCCYCAGGTCC
-AGCCTCAGGCA-
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SAGCCYCAGGTCC
-CGCCTCAGGCA-
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:SAGCCYCAGGTCC-
--GCCTCAGGGCAT
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:SAGCCYCAGGTCC
-AGCCTCAGGCA-
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:SAGCCYCAGGTCC-----
-ATCCACAGGTGCGAAAA
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SAGCCYCAGGTCC-
--SCCTSAGGSCAW
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-SAGCCYCAGGTCC-
NTNGCCTCAGGCNNN
 A C G T A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SAGCCYCAGGTCC-
TCACCTCTGGGCAG
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:SAGCCYCAGGTCC-
----NNCAGGTGCG
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SAGCCYCAGGTCC-
----NNCAGGTGNN
 A T G C C T G A A C T G T A G C A G T C A G T C A G T C C G T A A C T G A C T G G A C T A T G C A T G C A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G