Information for 6-CGGGWCMTTYCCTSRC (Motif 7)

T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
Reverse Opposite:
A C T G A G C T A T C G C T G A C A T G A C T G C T G A C T G A C G T A A C T G C T A G C G A T A G T C A G T C A G T C A C T G
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 14.7bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGGGWCMTTYCCTSRC
-GGGGATTTCC-----
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGGWCMTTYCCTSRC
NGGGGATTTCCC----
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGGWCMTTYCCTSRC
-GGGGATTTCC-----
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGGWCMTTYCCTSRC
-GGGAATTTCC-----
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGGWCMTTYCCTSRC
-GGGAATTTCC-----
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGGGWCMTTYCCTSRC
NRRGGGTCTT--------
 A C G T A C G T T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGGWCMTTYCCTSRC
NNGCACCTTTCTCC--
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGGGWCMTTYCCTSRC
AGGGGAATCCCCT---
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGGGWCMTTYCCTSRC
------ATTTCCTGTN
 T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CGGGWCMTTYCCTSRC
AGAGCGGGGTCAAGTA-----
 A C G T A C G T A C G T A C G T A C G T T A G C A C T G A C T G A C T G C G T A A G T C G T A C A C G T A G C T A G C T A G T C G A T C A G C T A T G C C T G A A G T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T