Information for 8-AACGTGAAGG (Motif 27)

C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A G T C G T C A A G T C A C T G A G C T A C G T
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.4 +/- 17.7bp
Average Position of motif in Background54.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACGTGAAGG---
AGAAAGTGAAAGTGA
 A C G T A C G T C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACGTGAAGG-
GAAAGTGAAAGT
 A C G T C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AACGTGAAGG
GGGTACGTGC---
 A C G T A C G T A C G T C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACGTGAAGG
CACGTG----
 C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AACGTGAAGG
----NGAAGC
 C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACGTGAAGG
RTACGTGC---
 A C G T C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACGTGAAGG
-ACCGGAAG-
 C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACGTGAAGG
AACCGGAAGT
 C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACGTGAAGG
GGCGGGAARN
 C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACGTGAAGG
GGACGTGC---
 A C G T C G T A C T G A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T