Information for 13-GCKGGTGMGRARA (Motif 24)

A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A G T C A G T C A C T G A G T C C G T A A T G C A G T C G T A C A C T G A G T C
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 17.8bp
Average Position of motif in Background47.6 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCKGGTGMGRARA
-CAGGTGAGG---
 A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCKGGTGMGRARA
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCKGGTGMGRARA
SDGCAGGTGCNS---
 A C G T A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGTGMGRARA
ANTGCGGGGGCGGN--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCKGGTGMGRARA
NNCAGGTGCG----
 A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCKGGTGMGRARA
NNCAGGTGNN----
 A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCKGGTGMGRARA--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCKGGTGMGRARA
GGCGGGGGCGGGGG
 A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCKGGTGMGRARA
NNCAGGTGTN----
 A C G T A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCKGGTGMGRARA
--AGGTGTGAAA-
 A C T G A G T C A C T G A C T G A T C G A C G T A C T G G T A C A C T G C T A G C G T A C T G A C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T