Information for 6-GTAGGACAAG (Motif 23)

A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C G T A G T C G T A C A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 30.7bp
Average Position of motif in Background52.3 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTAGGACAAG----
ATTTACGACAAATAGC
 A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTAGGACAAG
--TTGACAG-
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTAGGACAAG-----
NNAGGGACAAGGGCNC
 A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGACAAG
TATAAGTAGGTCAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTAGGACAAG----
--AGGTCAAGGTCA
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTAGGACAAG
--TTGACAGG
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTAGGACAAG
-RHTGWCAR-
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAGGACAAG----
--AGGTCAAGGTCA
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTAGGACAAG--
--AAAACAATGG
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTAGGACAAG--
--RNAACAATGG
 A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G