Information for 8-AARTATTTATTTC (Motif 9)

G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
Reverse Opposite:
C A T G C G T A C T G A C G T A G C A T C G T A C G T A C G T A A G C T T C G A G A T C G C A T A C G T
p-value:1e-20
log p-value:-4.785e+01
Information Content per bp:1.633
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.7 +/- 34.4bp
Average Position of motif in Background50.5 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0019.1_Dbx2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AARTATTTATTTC
TTTAATTAATTAATTC
 A C G T A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AARTATTTATTTC
AAATTAATTAATC-
 A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AARTATTTATTTC
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0008.1_Barx2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AARTATTTATTTC--
TAAGTAATTAGTTATA
 A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C A C G T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AARTATTTATTTC
GAATGTTTGTTT-
 G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AARTATTTATTTC
AGTAATTAATTACTTC
 A C G T A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C

PH0142.1_Pou1f1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AARTATTTATTTC
GATTAATTAATTAAGTC
 A C G T A C G T A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

PH0106.1_Msx1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AARTATTTATTTC
TGCAACTAATTAATTC
 A C G T A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
A C G T T C A G G T A C G C T A C T G A G A T C G A C T G T C A C G T A C G A T C G A T C T G A C T G A A C G T G C A T G T A C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AARTATTTATTTC--
CNNAGTAATTAATTNNC
 A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C A C G T A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

PH0028.1_En1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AARTATTTATTTC
GCGAACTAATTAATGC
 A C G T A C G T A C G T G T C A C G T A C T A G A G C T C T G A C G A T C G A T G C A T C G T A G C A T A G C T A C G T G T A C
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C