Information for 5-TAGAGCGCCC (Motif 3)

C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C
Reverse Opposite:
A C T G A C T G A T C G T A G C A T C G G T A C A C G T A G T C A C G T G C T A
p-value:1e-28
log p-value:-6.482e+01
Information Content per bp:1.833
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.5 +/- 20.3bp
Average Position of motif in Background60.5 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGAGCGCCC
-AGCGCGCC-
 C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGAGCGCCC----
NNNGGGGCGCCCCCNN
 A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAGAGCGCCC---
ATAAGGGCGCGCGAT
 A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAGAGCGCCC---
ATAAAGGCGCGCGAT
 A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGCGCCC
GGTTAGAGACCT-
 A C G T A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAGAGCGCCC
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAGAGCGCCC
--CAGCC---
 C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TAGAGCGCCC-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TAGAGCGCCC-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TAGAGCGCCC-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G T A T A C G C G T A A C T G A T G C A C T G A T G C T A G C G T A C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T