Information for 23-CTACTGTCCT (Motif 25)

A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G T A C G C G T A A G T C C G T A A T C G A G C T C T G A A C T G
p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.878
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets43.9 +/- 26.1bp
Average Position of motif in Background68.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CTACTGTCCT--
----TGACCTYA
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTACTGTCCT-
---GTGACCTT
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTGTCCT-
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTGTCCT-
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTACTGTCCT---
CNNTTGACCTTTG
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTACTGTCCT
----TGACCT
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTACTGTCCT---
---CTGACCTTTG
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTACTGTCCT----
----TGACCTTGAT
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTACTGTCCT--
TGACCCAGTGACCTAC
 A C G T A C G T A C G T A C G T A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTACTGTCCT---
---NTGACCTTGA
 A G T C A G C T C T G A A T G C A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A