Information for 13-TRCTATTAATAAT (Motif 18)

C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T
Reverse Opposite:
C T G A A G C T A G C T C G T A C G A T A C G T C G T A C G T A C G A T C T G A C T A G G A T C G C T A
p-value:1e-15
log p-value:-3.470e+01
Information Content per bp:1.668
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets40.4 +/- 21.5bp
Average Position of motif in Background32.7 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TRCTATTAATAAT
-NTAATTAATAT-
 C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TRCTATTAATAAT
ACCGGCAATTAATAAA
 A C G T A C G T A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TRCTATTAATAAT--
CTACCAATAAAATTCT
 A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0018.1_Dbx1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TRCTATTAATAAT--
TAATTAATTAATAATTA
 A C G T A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TRCTATTAATAAT---
NAGCCATTAATTANTTA
 A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TRCTATTAATAAT---
NAGCCATTAATTANTTA
 A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TRCTATTAATAAT
TCTTTANTAATANN
 A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TRCTATTAATAAT
-GCTATTTATAGC
 C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TRCTATTAATAAT--
TAATTAATTAATAACTA
 A C G T A C G T C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TRCTATTAATAAT---
AGTTATTAATGAGGTC
 C G A T C T A G G A T C A G C T C G T A G C A T A C G T G T C A C G T A C G A T C T G A T C G A A G C T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C