Information for 12-GTGCTGCTAT (Motif 15)

A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T
Reverse Opposite:
C G T A A G C T G T C A A T C G A G T C C G T A A C T G G T A C G T C A T A G C
p-value:1e-16
log p-value:-3.722e+01
Information Content per bp:1.842
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets28.2 +/- 19.0bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTGCTAT---
AGATGCTRCTRCCHT
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGCTGCTAT
-NGCTN----
 A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGCTGCTAT
NATGTTGCAA-
 A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGCTGCTAT----
NCCGTTGCTANGNGN
 A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGCTGCTAT----
NNCGTTGCTATGGNN
 A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGCTGCTAT--
CTGTTGCTAGGS
 A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCTGCTAT--------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTGCTAT----
TNNTGCTACTGTNNNN
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGCTGCTAT
MTGATGCAAT
 A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGCTGCTAT
CNGTCCTCCC--
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T G C A C G T C T G A A C G T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T