Information for 9-CTAACTAAVATTT (Motif 6)

A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A C G T A C G T C G A T A G C T C G T A A C T G A C G T A C G T G T C A A C T G
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 26.3bp
Average Position of motif in Background56.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CTAACTAAVATTT
CCTTAGTTAACTAAAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAACTAAVATTT
GTTAACTAGN----
 A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTAACTAAVATTT--
GCTAATTATAATTATC
 A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTAACTAAVATTT
NNNACCTCATTATCNTN-
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTAACTAAVATTT
NNNTAACAATTATAN
 A C G T A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAACTAAVATTT--
TATAATTATAATATTC
 A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTAACTAAVATTT
CTAATTAA-----
 A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTAACTAAVATTT
AGCTCATTAT-----
 A C G T A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTAACTAAVATTT
NTAATTAATAT--
 A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAACTAAVATTT
NCTAATTAANN---
 A C G T A G T C C A G T G T C A C G T A A G T C C G A T C T G A C G T A T C G A C G T A A C G T A G C T A C G T
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T A C G T A C G T