Information for 6-AGCGCCCCCGTGW (Motif 3)

C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T
Reverse Opposite:
G C T A A T G C C G T A A T G C A C T G A C T G A C T G A T C G A C T G G T A C T A C G A G T C A C G T
p-value:1e-16
log p-value:-3.718e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 31.2bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGCGCCCCCGTGW
----NCCACGTG-
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGCGCCCCCGTGW--
-----NCACGTGACN
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGCGCCCCCGTGW
-----GCACGTGT
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCCCGTGW-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

Mycn/MA0104.3/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGCGCCCCCGTGW
----GCCACGTG-
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCGCCCCCGTGW-
----GGCACGTGTC
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCCCGTGW
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0043.1_Max_1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCGCCCCCGTGW-----
--TGACCACGTGGTCGGG
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGCGCCCCCGTGW--
-----CCACGTGGNN
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AGCGCCCCCGTGW
-----GCACGTGA
 C G T A A C T G A T G C A C T G A G T C A T G C A G T C T A G C A G T C A T C G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A