Information for 6-GAATCGGCGG (Motif 16)

A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C A C T G C G T A A G C T A C G T A G T C
p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.868
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets55.6 +/- 31.8bp
Average Position of motif in Background51.2 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAATCGGCGG------
NAGANTGGCGGGGNGNA
 A C G T A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAATCGGCGG---
GGGNGGGGGCGGGGC
 A C G T A C G T A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAATCGGCGG-----
-AGGGGGCGGGGCTG
 A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAATCGGCGG---
GGCGGGGGCGGGGG
 A C G T A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATCGGCGG---
-RGKGGGCGGAGC
 A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAATCGGCGG-
NGCGTGGGCGGR
 A C G T A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAATCGGCGG----
--BTKGGCGGGAAA
 A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAATCGGCGG--
-TAATGGCGGNC
 A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAATCGGCGG-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAATCGGCGG---
--GGGGGCGGGGC
 A C T G C G T A C T G A G C A T T A G C A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C