p-value: | 1e-9 |
log p-value: | -2.180e+01 |
Information Content per bp: | 1.843 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 37.8 +/- 30.4bp |
Average Position of motif in Background | 63.2 +/- 16.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGYCATCARGSYTTKS GGCCATTAAC------ |
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PH0134.1_Pbx1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGYCATCARGSYTTKS TCACCCATCAATAAACA- |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGYCATCARGSYTTKS TGAGTCAGCA-------- |
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MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGYCATCARGSYTTKS -GTCATN--------- |
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PB0193.1_Tcfe2a_2/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGYCATCARGSYTTKS CCNNACCATCTGGCCTN-- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGYCATCARGSYTTKS GYCATCMATCAT------- |
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PB0042.1_Mafk_1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGYCATCARGSYTTKS AAGTCAGCANTTTTN-- |
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Atf3/MA0605.1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGYCATCARGSYTTKS ACGTCATC--------- |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGYCATCARGSYTTKS RGCCATYAATCA---- |
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Nr2e3/MA0164.1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AGYCATCARGSYTTKS ------CAAGCTT--- |
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