Information for 5-ATGGCACCACCTG (Motif 5)

T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G
Reverse Opposite:
A T G C C G T A T C A G T A C G C G A T C T A G A T C G G A C T A C T G A T G C G T A C G T C A A C G T
p-value:1e-14
log p-value:-3.231e+01
Information Content per bp:1.537
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 3.2bp
Average Position of motif in Background43.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.75
Offset:5
Orientation:forward strand
Alignment:ATGGCACCACCTG--
-----ACCACCTGTT
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.73
Offset:5
Orientation:forward strand
Alignment:ATGGCACCACCTG--
-----NNCACCTGNN
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.73
Offset:5
Orientation:forward strand
Alignment:ATGGCACCACCTG--
-----AACACCTGCT
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.71
Offset:4
Orientation:forward strand
Alignment:ATGGCACCACCTG---
----SNGCACCTGCHS
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.70
Offset:5
Orientation:forward strand
Alignment:ATGGCACCACCTG--
-----CGCACCTGCT
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:ATGGCACCACCTG--
------NCACCTGTN
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.69
Offset:5
Orientation:forward strand
Alignment:ATGGCACCACCTG--
-----TACACCTGTC
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATGGCACCACCTG---
NNGGCGACACCTCNNN
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:ATGGCACCACCTG----
-----NVCAGCTGBBNN
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCACCTG-----
-NNTNCGCACCTGTNGAN
 T G C A C A G T C A T G T A C G T G A C C T G A T A G C G A T C G C T A A T G C A G T C G C A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T