Information for 4-CTCTGCTGCCATC (Motif 4)

A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C
Reverse Opposite:
A T C G G T C A C A G T A C T G A C T G G T A C G T C A T A C G A G T C G T C A A C T G C G T A T A C G
p-value:1e-14
log p-value:-3.263e+01
Information Content per bp:1.773
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif46.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets46.4 +/- 21.8bp
Average Position of motif in Background49.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTCTGCTGCCATC---
----GCCGCCATCTTG
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTCTGCTGCCATC---
----GCNGCCATCTTG
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCATC-
-----ATGCCAACC
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTCTGCTGCCATC
------TGCCAA-
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCATC-
-----CTGCCCGCA
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCTGCTGCCATC
----CGTGCCAAG
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTCTGCTGCCATC-----
--ACTATGCCAACCTACC
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCATC
-----TTGCCAAG
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTCTGCTGCCATC----
-------GCCATCTGTT
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCTGCTGCCATC-
----GGTGCCAAGT
 A T G C G C A T G T A C A C G T C T A G A T G C C A G T A C T G A G T C A G T C G T C A C A G T A T G C A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T