Information for 4-TGACCTCTTG (Motif 3)

A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G
Reverse Opposite:
G T A C C G T A C G T A A C T G C G T A A C T G A T C G C G A T A T G C C T G A
p-value:1e-15
log p-value:-3.457e+01
Information Content per bp:1.840
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif172.3
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets56.3 +/- 22.0bp
Average Position of motif in Background52.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGACCTCTTG
TGACCYCT--
 A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCTCTTG--
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGACCTCTTG
TGACCTYA--
 A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTCTTG--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTCTTG
CNNTTGACCTTTG-
 A C G T A C G T A C G T A C G T A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGACCTCTTG-----
TGACCTTTTGACCTC
 A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G A C G T A C G T A C G T A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTCTTG--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TGACCTCTTG--
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGACCTCTTG
TGACCT----
 A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCTTG-----
TTGACCTTTTGACCTT
 A C G T A G C T A T C G C G T A A T G C G T A C C G A T G T A C A C G T G C A T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T