Information for 3-TAGGGCGCCA (Motif 2)

A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A
Reverse Opposite:
C G A T A C T G T C A G T G A C T A C G T A G C G A T C G T A C A G C T T G C A
p-value:1e-20
log p-value:-4.708e+01
Information Content per bp:1.667
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.55%
Number of Background Sequences with motif443.0
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets61.9 +/- 19.5bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TAGGGCGCCA--
TTTGGCGCCAAA
 A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGCCA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGCCA-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAGGGCGCCA
-AGCGCGCC-
 A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGGGCGCCA----
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TAGGGCGCCA-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAGGGCGCCA---------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAGGGCGCCA--
---CGTGCCAAG
 A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TAGGGCGCCA-
-----TGCCAA
 A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGGGCGCCA-
-TGGGGCCCAC
 A C G T T C G A C A T G C T A G A T C G A T G C A C T G A G T C T G A C G C T A A C G T
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C