Information for 10-CGTGATTCTTCTG (Motif 16)

A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C C G T A A G T C A C T G
p-value:1e-6
log p-value:-1.407e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 16.2bp
Average Position of motif in Background49.9 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGTGATTCTTCTG---
--TAATTGTTCTAAAC
 A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:2
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------CGTGATTCTTCTG
ACTYKNATTCGTGNTACTTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATTCTTCTG
NCACGTGACN------
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-10
Orientation:reverse strand
Alignment:----------CGTGATTCTTCTG
NTNNTNGTCACGTGACNNNTNC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C A C G T

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGTGATTCTTCTG
GGTGACTCATC--
 A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGTGATTCTTCTG
-ATGACTCATC--
 A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGTGATTCTTCTG
NCGTGACN------
 A C G T A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGTGATTCTTCTG
CNGTGATTTN----
 A C G T A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGTGATTCTTCTG
ATCACGTGAT-------
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGTGATTCTTCTG
TGTGACTCATT--
 A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T