Information for 8-GTCCACAGGGCAG (Motif 10)

A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T A C T G A T C G G T C A A T G C
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 34.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTCCACAGGGCAG
---CAAAGGTCAG
 A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCCACAGGGCAG
-GCCTCAGGGCAT
 A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTCCACAGGGCAG
TGCCCNNAGGGCA-
 A C G T A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCCACAGGGCAG
TGCCCTNAGGGCA-
 A C G T A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCCACAGGGCAG
TCACCTCTGGGCAG
 A C G T A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCCACAGGGCAG
GTCCCCAGGGGA-
 A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCCACAGGGCAG
TAGGGCAAAGGTCA-
 A C G T A C G T A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCCACAGGGCAG
TGCCCTNAGGGCA-
 A C G T A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTCCACAGGGCAG
----TNNGGGCAG
 A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCCACAGGGCAG
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A T C G A C G T A T G C A G T C C G T A A G T C G T C A A C T G A C T G A C T G A G T C C G T A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T