Information for 9-ATTTGSARTRAKM (Motif 8)

C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
Reverse Opposite:
A C T G G T A C A C G T G A C T C G T A A G T C A C G T A T C G A G T C C G T A C G T A C G T A A C G T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 24.1bp
Average Position of motif in Background50.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTTGSARTRAKM
TTCATTTGCATAT---
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTTGSARTRAKM
ATTTGCATAA---
 C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGSARTRAKM
CTCATTTGCATW----
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATTTGSARTRAKM
ATTTGCATAT---
 C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGSARTRAKM
TNTAATTTGCATANNN-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGSARTRAKM
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGSARTRAKM
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATTTGSARTRAKM-
CAATTGCAAAAATAT
 A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGSARTRAKM
BTVATTWGCATA----
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATTTGSARTRAKM
ATTTGCATA----
 C G T A A C G T A C G T A C G T A C T G A T G C C G T A C T A G A C G T C T A G C G T A A C T G G T A C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T