Information for 8-GCCCCCTAKCTGT (Motif 7)

C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C T G T G A C G A C T C G T A A C T G C T A G A C T G A C T G A C T G G A T C
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.836
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets70.4 +/- 9.3bp
Average Position of motif in Background52.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTAKCTGT
CGCCCCCTGACA--
 A C G T C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCTAKCTGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAKCTGT-
GACCCCCCGCTGTG
 C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCTAKCTGT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:8
Orientation:forward strand
Alignment:GCCCCCTAKCTGT-
--------GCTGTG
 C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAKCTGT--
GACCCCCCGCTGCGC
 C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCTAKCTGT--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCCCTAKCTGT-
--CCCCCTGCTGTG
 C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAKCTGT--
GGCCYCCTGCTGDGH
 C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTAKCTGT
TTCCCCCTAC----
 A C G T C A T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C T G A G C T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T