Information for 3-TTGMAAATTCTTTTGA (Motif 4)

G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A
Reverse Opposite:
C G A T G T A C C T G A G T C A C G T A G T C A T C A G C G T A C T G A A C G T A G C T A C G T A C T G A G T C C G T A C T G A
p-value:1e-13
log p-value:-3.121e+01
Information Content per bp:1.717
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.2 +/- 22.9bp
Average Position of motif in Background41.9 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGMAAATTCTTTTGA-
---AAAATTGTTATGAA
 G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGMAAATTCTTTTGA
TTATGCAAAT--------
 A C G T A C G T G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGMAAATTCTTTTGA
ATATGCAAAT--------
 A C G T A C G T G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TTGMAAATTCTTTTGA--
----TAATTGTTCTAAAC
 G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTGMAAATTCTTTTGA--
--TTCAATTGTTCTAAAA
 G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A A C G T A C G T
A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGMAAATTCTTTTGA
ATATGCAAATNNN-----
 A C G T A C G T G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGMAAATTCTTTTGA-
-AANTTATTGTTCTNNA
 G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGMAAATTCTTTTGA-
GGAAAAATTGTTAGGAA
 G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTGMAAATTCTTTTGA--
--GCTAATTATAATTATC
 G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A A C G T A C G T
A C G T A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGMAAATTCTTTTGA
CCTTGCAATTTTTNN---
 A C G T A C G T G A C T C G A T T C A G G T A C G T C A T C G A C G T A G A C T C G A T A G T C A C G T C G A T C A G T A G C T C A T G G C T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T