Information for 4-CGGCGCCCTC (Motif 3)

A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C
Reverse Opposite:
A C T G C T G A A C T G T A C G A C T G A G T C A T C G A G T C A G T C T C A G
p-value:1e-14
log p-value:-3.239e+01
Information Content per bp:1.843
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif95.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets45.0 +/- 21.4bp
Average Position of motif in Background47.5 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGCCCTC--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGGCGCCCTC
TGGGGCCCAC
 A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGCGCCCTC
-GGCGCGCT-
 A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGCGCCCTC-------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGCCCTC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGCCCTC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGCGCCCTC
TTTGGCGCCAAA
 A C G T A C G T A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGCCCTC--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

ZBTB7A/MA0750.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGCGCCCTC---
-GGCGACCACCGA
 A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T A C G T
A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGCGCCCTC---------
TAGCGCCCCCTGGTGGCCA
 A G T C T C A G C T A G A T G C A C T G A G T C A T G C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A