Information for 7-TATATAAATG (Motif 13)

A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G
Reverse Opposite:
T A G C G C T A C A G T A G C T C G A T T G C A A G C T T G C A G A C T T G C A
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.666
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif607.4
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets50.3 +/- 26.7bp
Average Position of motif in Background49.5 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TATATAAATG
TCTTTATATATAAATA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TATATAAATG
TATGCAAAT-
 A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TATATAAATG------
-GTATAAAAGGCGGGG
 A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TATATAAATG------
-GTATAAAAGGCGGGG
 A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TATATAAATG
AATATGCAAATT
 A C G T A C G T A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TATATAAATG
TATGCAAAT-
 A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TATATAAATG-
TTATGCAAATTA
 A C G T A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TATATAAATG-
TTATGCAAATTA
 A C G T A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TATATAAATG
TTATGCAAAT-
 A C G T A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TATATAAATG--
--GCTAATTGCT
 A C G T C T G A A C G T T C G A A C G T G C T A T C G A G T C A C G A T A T C G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T