Information for 12-CAGGCGCAGTCAC (Motif 11)

G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G T C A C G T A C T G T A G C A C T G A T G C A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.442e+01
Information Content per bp:1.830
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.1 +/- 18.7bp
Average Position of motif in Background42.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC
-----BCAGACWA
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC
--TGCCCAGNHW-
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC
-----CCAGACAG
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCGCAGTCAC------
YCAGGCWCAGTACCAGGCTC
 A C G T G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC--
-----CCAGACRSVB
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGCGCAGTCAC
-AGCCTCAGGCA-
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGGCGCAGTCAC
--TGCGCAGGCGC
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CAGGCGCAGTCAC--
-------AGTCACGC
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGCGCAGTCAC
-AGCCTCAGGCA-
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGCGCAGTCAC
-CGCCTCAGGCA-
 G T A C T C G A A C T G A T C G A G T C A C T G A G T C C G T A A C T G G A C T A G T C C G T A A G T C
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T