Information for 5-CATCTGTCCTCTT (Motif 5)

A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G C T G A A C T G A T C G C T G A A G T C C G T A C T A G C G T A A C G T C T A G
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 16.1bp
Average Position of motif in Background37.1 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------CATCTGTCCTCTT
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATCTGTCCTCTT
ACCATCTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATCTGTCCTCTT----
CAKCTGKYCYYTTYCCC
 A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATCTGTCCTCTT
GCCATCTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCTGTCCTCTT
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCTGTCCTCTT
RCCATMTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGTCCTCTT
GCCAGCTGBTNB---
 A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGTCCTCTT
NVCAGCTGBBNN---
 A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATCTGTCCTCTT
CCATATGT------
 A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CATCTGTCCTCTT
CNGACACCTGTTCNNN-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G A T A C T G A G C T A T G C G T A C A G C T A G T C A G C T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T