Information for 2-CCCAHGTTGAGGGAGG (Motif 4)

A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G
Reverse Opposite:
T A G C G T A C A C G T A G T C A G T C A G T C G A C T T G A C G T C A T C G A T G A C C G T A A C G T T A C G A T C G C T A G
p-value:1e-14
log p-value:-3.236e+01
Information Content per bp:1.718
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.8 +/- 24.3bp
Average Position of motif in Background44.5 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CCCAHGTTGAGGGAGG-
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:CCCAHGTTGAGGGAGG----
----------GGGAGGACNG
 A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCAHGTTGAGGGAGG
CCCCCTGCTGTG-----
 A C G T A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCAHGTTGAGGGAGG
TCNCCTGCTGNGNNN--
 A C G T A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCCAHGTTGAGGGAGG--
------GTGGGGGAGGGG
 A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCAHGTTGAGGGAGG
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCAHGTTGAGGGAGG
GACCCCCCGCTGTG-----
 A C G T A C G T A C G T A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCCAHGTTGAGGGAGG----
-----GGGGGGGGGGGGGGA
 A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCCAHGTTGAGGGAGG
--CCTGCTGAGH----
 A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCAHGTTGAGGGAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A G T C A T G C A G T C G T C A G C A T A C T G A G C T A C G T A C T G C T G A C T A G C T A G C T A G C G T A A C T G A T C G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C