Information for 5-ATGCCACCTA (Motif 3)

G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T
p-value:1e-18
log p-value:-4.242e+01
Information Content per bp:1.940
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.4 +/- 26.6bp
Average Position of motif in Background51.2 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATGCCACCTA
ATGCCAACC-
 G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ATGCCACCTA
-TGACACCT-
 G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATGCCACCTA---
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ATGCCACCTA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGCCACCTA----
ACATGCTACCTAATAC
 A C G T A C G T G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGCCACCTA
-TCACACCT-
 G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGCCACCTA
-TGTCANYT-
 G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATGCCACCTA----
ACTTGCTACCTACACC
 A C G T A C G T G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGCCACCTA
-TCACACCT-
 G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATGCCACCTA
ATGCCCACC-
 G T C A A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G A T C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T