Information for 10-CGCGGACGGCGTC (Motif 9)

A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C T G A G T C A C T G
p-value:1e-7
log p-value:-1.672e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 26.6bp
Average Position of motif in Background49.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGACGGCGTC
NCGCGGACGTTG--
 A C G T A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGCGGACGGCGTC
GCCGCGCAGTGCGT-
 A C G T A C G T A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGCGGACGGCGTC---
----TAAGGCGTCTTG
 A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

BATF3/MA0835.1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGCGGACGGCGTC-
TGATGACGTCATCA
 A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGCGGACGGCGTC-----
--TNAACGACGTCGNCCA
 A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGACGGCGTC
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGCGGACGGCGTC
-CCAGACRSVB--
 A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGCGGACGGCGTC------
--AGCTCGGCGCCAAAAGC
 A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGACGGCGTC
GGCGGGGGCGGGGG-
 A C G T A C G T A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CGCGGACGGCGTC------
--CCTTCGGCGCCAAAAGG
 A G T C A C T G A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G