Information for 6-GATTTATATA (Motif 5)

T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A
Reverse Opposite:
A C G T G T C A A C G T G T C A A G C T C G T A C G T A T C G A A C G T A T G C
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif30.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.9 +/- 27.4bp
Average Position of motif in Background46.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GATTTATATA------
NANTTATATATAANGN
 T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GATTTATATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GATTTATATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GATTTATATA
-ATTTGCATA
 T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GATTTATATA
-ATTTGCATA
 T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GATTTATATA--
AATTTGCATANT
 T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATTTATATA-
-ATTTGCATAA
 T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GATTTATATA-
-ATTTGCATAT
 T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATATA-
TAATTTGCATAA
 A C G T T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATATA-
NTGATTTATGGCC
 A C G T A C G T T A C G C G T A A C G T A C G T A C G T C T G A A C G T G T C A A C G T C G T A A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C