Information for 4-TGAAAATGTSACAATT (Motif 3)

C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A G C A T C G A T A C T G C G A T T A G C C G T A A G T C C G T A C G A T A G C T A G C T A C G T A G T C C G T A
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.717
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.0 +/- 22.5bp
Average Position of motif in Background37.2 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAAAATGTSACAATT
GHWACAWTGTWDCWA--
 A C G T C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGAAAATGTSACAATT--
----NNCNNAACAATTNT
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGAAAATGTSACAATT
------KTTCACACCT
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGAAAATGTSACAATT
-GAAACTGAAACT---
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGAAAATGTSACAATT-----
----TNCNNAACAATTTTTNC
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGAAAATGTSACAATT
GHTACAWTGTADCHR--
 A C G T C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGAAAATGTSACAATT----
---GATATTGACAGCTGCGT
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TGAAAATGTSACAATT--
--------TGGCAGTTGN
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TGAAAATGTSACAATT
--------TGTCANYT
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TGAAAATGTSACAATT
-GAAAMTGAAACT---
 C G A T C T A G C G T A C T G A C T G A C G T A G C A T C T A G C G A T A T C G C G T A A G T C C G T A C G T A A G C T A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T