Information for 6-AAGTCTGCAA (Motif 7)

G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A
Reverse Opposite:
G C A T C G A T T C A G G T A C C G T A C T A G C G T A G A T C C A G T C G A T
p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.617
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.34%
Number of Background Sequences with motif1774.4
Percentage of Background Sequences with motif3.66%
Average Position of motif in Targets46.1 +/- 28.3bp
Average Position of motif in Background50.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGTCTGCAA-
-GGTCTGGCAT
 G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAGTCTGCAA
VBSYGTCTGG--
 A C G T A C G T G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGTCTGCAA
TWGTCTGV--
 G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AAGTCTGCAA-
NAACATCTGGATN
 A C G T A C G T G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A A C G T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGTCTGCAA
CTGTCTGG--
 G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGTCTGCAA
AACATCTGGA-
 A C G T G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAGTCTGCAA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGTCTGCAA
NNNANTGA--
 G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGTCTGCAA--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGTCTGCAA-----
AAGTCAGCANTTTTN
 G C T A G T C A C T A G G C A T G A T C A C G T C A T G A G T C G C T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A