Information for 9-TKGGARGSTCCTY (Motif 6)

A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C T G G T C A A T G C G A T C A G T C A C G T A G T C A G T C G T C A C G T A
p-value:1e-10
log p-value:-2.352e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.1 +/- 31.2bp
Average Position of motif in Background50.3 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TKGGARGSTCCTY
-GGGAATTTCC--
 A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TKGGARGSTCCTY
-GGGAATTTCC--
 A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TKGGARGSTCCTY
-GGGAAATCCCCN
 A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TKGGARGSTCCTY
--GGAAANCCCC-
 A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TKGGARGSTCCTY
--NRRGGGTCTT-
 A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TKGGARGSTCCTY-
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TKGGARGSTCCTY
TGGGGAAGGGCM--
 A C G T A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TKGGARGSTCCTY----
TACGAGACTCCTCTAAC
 A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TKGGARGSTCCTY
CGTGGGTGGTCC--
 A C G T A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TKGGARGSTCCTY
CSTGGGAAAD-----
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T A G C A T G A T C G A C G T A G T C A G T C A C G T A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T