Information for 6-AGTGGCACCTATT (Motif 3)

C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C T G A C T G A C G T A C T G G T A C A G T C C G T A G A T C A C G T
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 25.6bp
Average Position of motif in Background25.3 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGTGGCACCTATT
--TGACACCT---
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTGGCACCTATT-
AAAATGGCGCCATTTT
 A C G T A C G T C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTGGCACCTATT-
ATAAATGACACCTATCA
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTGGCACCTATT
KTTCACACCT---
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTGGCACCTATT
--TCACACCT---
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGTGGCACCTATT
--TCACACCT---
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTGGCACCTATT
--TGTCANYT---
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTGGCACCTATT----
NTCNTCCCCTATNNGNN
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTGGCACCTATT----
----CCACCTGTTGCAT
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGTGGCACCTATT
----NCACCTGTN
 C G T A C T A G A C G T A C T G A C T G A G T C C G T A A G T C G T A C A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T