p-value: | 1e-3 |
log p-value: | -7.471e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.24% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.2 +/- 36.5bp |
Average Position of motif in Background | 36.0 +/- 24.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCAGGTTAA GKVTCADRTTWC |
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ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCAGGTTAA- -VCAGGTRDRY |
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PB0081.1_Tcf1_1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTCAGGTTAA------ NNNTTAGTTAACTNANN |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCAGGTTAA -TRAGGTCA- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTCAGGTTAA- --CAGGTGAGG |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTCAGGTTAA---- GAAAACTAGTTAACATC |
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AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCAGGTTAA GCCTCAGGGCAT |
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Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCAGGTTAA GKMTCADRTTWC |
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PH0167.1_Tcf1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTCAGGTTAA------ NTTTTAGTTAACNNAGN |
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AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCAGGTTAA SCCTSAGGSCAW |
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