Information for 7-TAGGTGTCAGYCA (Motif 8)

A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
Reverse Opposite:
G C A T A T C G C T G A A G T C A C G T C A T G G T C A A G T C C G T A G T A C G T A C A C G T G T C A
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 20.3bp
Average Position of motif in Background66.4 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TAGGTGTCAGYCA-
-AGGTGNCAGACAG
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGHCAGACA
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTCA----
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTGA----
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTGA----
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTGAAM--
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTGA----
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTGA----
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGGTGTCAGYCA
-AGGTGTGA----
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TAGGTGTCAGYCA
--VBTGWCAGCB-
 A C G T C G T A A C T G A C T G A C G T A C T G A C G T G A T C C G T A A C T G G A C T A T G C C G T A
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T