Information for 5-GTCATGCTGC (Motif 7)

A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C
Reverse Opposite:
C T A G A T G C C G T A A C T G A G T C C G T A G A C T C T A G C T G A T A G C
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.843
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif113.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets50.4 +/- 28.9bp
Average Position of motif in Background46.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCTGC----
NNTCCTGCTGTGNNN
 A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCTGC----
TCNCCTGCTGNGNNN
 A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCTGC----
TNTCCTGCTGTGNNG
 A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCATGCTGC
GTCATN----
 A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTCATGCTGC--
--CCTGCTGAGH
 A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTGC
AGTCACGC---
 A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GTCATGCTGC---
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCATGCTGC----
GTCACGCTCNCTGA
 A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCTGC-
CCCCCTGCTGTG
 A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCATGCTGC--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A T C G A G C T A G T C C T G A A C G T A C T G G T A C A C G T A T C G A G T C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C