Information for 6-GGTGGCATAAGGG (Motif 4)

A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
Reverse Opposite:
A G T C A G T C G A T C A G C T A C G T C G T A A C G T A C T G A G T C A G T C C G T A A G T C A G T C
p-value:1e-11
log p-value:-2.690e+01
Information Content per bp:1.885
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 14.8bp
Average Position of motif in Background25.4 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCATAAGGG
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCATAAGGG
GGTTGGCAT-----
 A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCATAAGGG
TNNNNGGTGTCATNTNT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCATAAGGG
NGTGGGCAT-----
 A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTGGCATAAGGG
AGGTGTCA------
 A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTGGCATAAGGG
NTTGGCANN----
 A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCATAAGGG
NNTTGGCANN----
 A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTGGCATAAGGG
-TTGGCA------
 A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTGGCATAAGGG
-VTTRCATAAY--
 A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCATAAGGG
ARNTGACA------
 A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C G T G T C A C T G A C A T G C T A G A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T