Information for 3-CTGACATCTG (Motif 2)

T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G
Reverse Opposite:
A G T C C T G A A T C G C T G A G C A T A C T G C G A T A T G C C G T A A C T G
p-value:1e-15
log p-value:-3.531e+01
Information Content per bp:1.661
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.68%
Number of Background Sequences with motif1366.8
Percentage of Background Sequences with motif2.84%
Average Position of motif in Targets46.7 +/- 26.8bp
Average Position of motif in Background50.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CTGACATCTG-----
CCNNACCATCTGGCCTN
 A C G T A C G T T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTGACATCTG
-TGTCANYT-
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGACATCTG
YTGWCADY--
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGACATCTG---
-TGACACCTGTCA
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G A C G T A C G T A C G T
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

TGIF2/MA0797.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGACATCTG---
-TGACAGCTGTCA
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G A C G T A C G T A C G T
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGACATCTG---
-TGACACCTGTCA
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G A C G T A C G T A C G T
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

TGIF1/MA0796.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGACATCTG---
-TGACAGCTGTCA
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G A C G T A C G T A C G T
A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGACATCTG
CTGACCTTTG
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGACATCTG
VGCTGWCAVB--
 A C G T A C G T T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGACATCTG
TTGACAG---
 T G A C G C A T A T C G G C T A T G A C C G T A G A C T T A G C G A C T T C A G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T