Information for 8-RMCCACAGAAARA (Motif 13)

C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
Reverse Opposite:
A C G T G A C T C G A T A C G T A C G T A G T C A C G T A T C G A C G T A C T G A C T G A C T G A G C T
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets28.2 +/- 17.4bp
Average Position of motif in Background40.6 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-RMCCACAGAAARA
AAACCACAGAN---
 A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--RMCCACAGAAARA
NWAACCACADNN---
 A C G T A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-RMCCACAGAAARA
AAACCACAGC----
 A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--RMCCACAGAAARA
NAAACCACAG-----
 A C G T A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RMCCACAGAAARA
AAACCACANN----
 A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RMCCACAGAAARA
AAACCGCAAA----
 A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RMCCACAGAAARA
GCGACCACCGAA---
 A C G T A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RMCCACAGAAARA
GCGACCACCGAA---
 A C G T A C G T C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RMCCACAGAAARA
---CACAGN----
 C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RMCCACAGAAARA
---AACAGGAAGT
 C T G A G T A C A G T C A G T C C G T A A T G C C G T A A C T G C G T A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T