Information for 7-CAGGTBCAGTSAC (Motif 12)

G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C
Reverse Opposite:
A C T G G A C T A T G C C T G A A T G C A C G T A C T G T C A G C T G A G T A C A T G C A G C T A C T G
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.753
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.9 +/- 23.3bp
Average Position of motif in Background45.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTBCAGTSAC
TCAGNGAGCGTGAC
 A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTBCAGTSAC------
YCAGGCWCAGTACCAGGCTC
 A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGGTBCAGTSAC--
-NAGGTCANTGACCT
 G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGGTBCAGTSAC----
-TGACCCAGTGACCTAC
 G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTBCAGTSAC
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CAGGTBCAGTSAC-
------NCGTGACN
 G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTBCAGTSAC
GACAGGTGTN-----
 A C G T A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGGTBCAGTSAC
AACAGGTGT------
 A C G T A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTBCAGTSAC
SDGCAGGTGCNS----
 A C G T A C G T A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTBCAGTSAC---
NNNANTGCAGTGCNNTT
 A C G T G T A C T C G A A T C G A C T G G A C T A G T C A G T C G T C A A T C G A G C T A T C G C T G A A G T C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T