Information for 5-CACGGGGGCG (Motif 5)

A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
Reverse Opposite:
T G A C A C T G A G T C A T G C T A G C G A T C A T G C A T C G A C G T A C T G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.744
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif160.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets56.7 +/- 20.9bp
Average Position of motif in Background50.1 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CACGGGGGCG
CACGTGGN--
 A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CACGGGGGCG
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CACGGGGGCG
CACGTGGC--
 A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CACGGGGGCG
GGTCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CACGGGGGCG
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACGGGGGCG
ACACGTGC---
 A C G T A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACGGGGGCG
NNCACGTGGT--
 A C G T A C G T A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACGGGGGCG
CACGTG----
 A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACGGGGGCG
CACGTGBN--
 A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACGGGGGCG
NGCACGTGNT--
 A C G T A C G T A G T C C G T A A T G C A T C G C T A G A T C G A T C G T C A G T G A C A C T G
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T