Information for 4-SCTCCCTCCACAGGGA (Motif 3)

T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
Reverse Opposite:
G C A T A T G C A G T C G T A C G C A T A T C G A C G T A C T G A C T G C G T A C T A G A C T G A C T G C G T A A C T G A T G C
p-value:1e-13
log p-value:-3.215e+01
Information Content per bp:1.753
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 30.7bp
Average Position of motif in Background57.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-SCTCCCTCCACAGGGA------
ACCGCCNTCCACGTGTANNGACA
 A C G T T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

ZNF740/MA0753.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SCTCCCTCCACAGGGA
-CCCCCCCCAC-----
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:SCTCCCTCCACAGGGA-
---CCCCCCCGGGGGNN
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SCTCCCTCCACAGGGA
-CCCCCCCC-------
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SCTCCCTCCACAGGGA
GCTCCGCCCMCY----
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:SCTCCCTCCACAGGGA
-----ATCCAC-----
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-SCTCCCTCCACAGGGA
NCTTCCCGCCC------
 A C G T T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:SCTCCCTCCACAGGGA--
------TCCCNNGGGACN
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:SCTCCCTCCACAGGGA--
------TCCCCTGGGGAC
 T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0100.1_Zfp740_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--SCTCCCTCCACAGGGA
CCCCCCCCCCCACTTG--
 A C G T A C G T T A C G A G T C A C G T A G T C G T A C A G T C A C G T G T A C A G T C C G T A A T G C C G T A A C T G A C T G T A C G C G T A
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G A C G T A C G T