Information for 5-GTCTCTGAAA (Motif 4)

A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A
Reverse Opposite:
A G C T C G A T A G C T T G A C C G T A A T C G C G T A A C T G C T G A T A G C
p-value:1e-10
log p-value:-2.426e+01
Information Content per bp:1.651
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif13.25%
Number of Background Sequences with motif3262.7
Percentage of Background Sequences with motif6.76%
Average Position of motif in Targets52.8 +/- 28.3bp
Average Position of motif in Background50.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GTCTCTGAAA---
---ACTGAAACCA
 A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTCTCTGAAA---
---TTTGAAACCG
 A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTGAAA-
TTTCTNAGAAAN
 A C G T A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTGAAA---
ANTTCTCAGGAANNN
 A C G T A C G T A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTCTGAAA--
GNCTATAAAAGG
 A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCTCTGAAA--
-GCTCGTAAAAA
 A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTGAAA----
AAACCTCGTAAAATTT
 A C G T A C G T A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCTCTGAAA-
-CCTTTGATGT
 A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCTCTGAAA-
TTCTTGGAAAN
 A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTGAAA----
AAAGCTCGTAAAATTT
 A C G T A C G T A T C G G A C T G T A C G C A T T A G C C G A T A C T G T C G A G C T A T C G A A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T