Information for 4-CTTGTGGTTT (Motif 2)

G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
Reverse Opposite:
C G T A G C T A C G T A G T A C G T A C G T C A A G T C G T C A C G T A C T A G
p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.841
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif256.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets50.1 +/- 26.0bp
Average Position of motif in Background51.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CTTGTGGTTT
NNTGTGGTTT
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CTTGTGGTTT-
-CTGTGGTTTN
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGTTT
GTCTGTGGTTT
 A C G T G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGTTT-
NNHTGTGGTTWN
 A C G T G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CTTGTGGTTT
GCTGTGGTTT
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CTTGTGGTTT
-TTGCGGTTT
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CTTGTGGTTT
TTTGCGGTTT
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTGTGGTTT---
--TGTGGATTNNN
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTTGTGGTTT--
NNTGTGGATTSS
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTTGTGGTTT
---GTGGAT-
 G A T C G C A T A C G T A C T G A C G T A C T G A C T G C G A T C A G T G C A T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T